Center for Translational Genomics and Bioinformatics

NGS

Performed protocols

Genomics

  • Whole Genome Sequencing,WGS 
    • eukaryotic
    • prokaryotic
  • Whole Exome Sequencing, WES 
  • Targeted sequencing 
    • Custom panels
    • 16S Bacterial
    • HLA
    • TCR
    • cfDNA
    • Crispr/Cas9 off target
    • Viral integration sites

Transcriptomics

  • RNA-seq
    • mRNA stranded
    • Ribo and globin depletion
    • Total RNA stranded
    • Small-RNA-seq 
    • FFPE RNA-seq human

Epigenetics

  • DNA methylation 
    • MeDIP-seq
    • RRBS-seq
    • WGBS-seq
    • Methylation array human
  • ChIP-seq
  • ATAC-seq

Single cell genomics

  • RNA-seq

Others

  • Cell lines genotyping

Next generation sequencing instruments


novaseq_6000


Novaseq 6000

next_seq


NextSeq 500

miseq


MiSeq

minion_photo


MinIon

hiseq2500


HiSeq 2500

Single Cell omics instruments


Chromium


Chromium

dropseq


Drop-seq

parsortix


Parsortix

deparray


Deparray

nadia


Nadia

nadia_innovate


Nadia Innovate

fluidic-factory


Fluid Factory 3D printer

 

Quality control Instruments


bioanalyzer2100


BioAnalyser 2100

tape_station4100


Tape Station 4100

qubit


Qubit

platereader


PlateReader AF2200

Other Instruments


mosquito


Mosquito liquid handler

epmotion


EP Motion X

covaris


Covaris E220

quantstudio


QuantStudio 12K

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